2013-2014 New Faculty Orientation

Thu 22 August 2013 by Dr. Dirk Colbry

Blog post added by Anonymous

Below are the slides I presented to the New Faculty Orientation held on August 20 and 26.

2013 New Faculty Orientation.pdf

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2013 Introduction to iCER - Buell Lab Seminar

Thu 01 August 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migrated to Confluence 4.0"

Below are slides for a seminar I am put together for C. Robin Buell's Bioinformatics workshop. This talk gives an overview of iCER and our reseources focusing on bioinformatics. I also introduced the concepts of plesently parallel jobs and give …

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Running ANSYS CFX5 solver on the HPCC

Tue 30 July 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migration of unmigrated content due to installation of a new plugin"

The following job submission script should get a parallel MPI solve of the cfx5solver working. In order for this to work on our system I needed to change the ANSYS module file to include …

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Presentation Slides from ASEE 2013, Atlanta GA

Mon 29 July 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migrated to Confluence 4.0"

Below are links to my slides for ASEE 2013 presentations:

  • Katy Luchini-Colbry and Dirk Colbry. “ Gadget Avalanche: A Technology Literacy Course for Novice Adults. ” ASEE Annual Conference Atlanta, GA, June 2013. [paper] [slides]

  • Dirk Colbry and Katy Luchini-Colbry. “ STEM inSight …

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Presentation Slides from XSEDE 2013, San Diego CA

Mon 29 July 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migrated to Confluence 4.0"

Below are links to my slides for XSEDE 2013 presentations:

  • Dirk Colbry, William Punch, Wolfgang Bauer, “The Institute for Cyber-Enabled Research: Regional Organization to Promote Computation in Science.” XSEDE 2013 Conference San Diego, CA, July 2013. [slides]

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Running the XSEDE MPI workshop examples on the HPCC

Tue 18 June 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migration of unmigrated content due to installation of a new plugin"

Differences in examples to get them to run on the HPCC.

Step 1:
Download these examples buy loading the power tools module and using the get example command:

module load powertools
getexample
getexample XSEDE_MPI_WORKSHOP …
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Spring 2013 Faculty Seminar Workshops

Tue 07 May 2013 by Dr. Dirk Colbry

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Here are the slides for the Intro to HPCC, Intro to MATLAB and Advanced HPCC Classes.

2013-05-07 Introduction to Matlab.pdf

2013-05-08 Introduction to HPCC.pdf
2013-05-08 Advanced HPCC.pdf

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Working with ImageJ plugins on the HPCC

Mon 06 May 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migration of unmigrated content due to installation of a new plugin"

Post written by Dan Perez (iCER Intern)

Errors

One of the iCER users has had problems getting ImageJ - ImageViewer scripts and plugins working on the HPCC. The ImageViewer classes, plugins, and scripts are in …

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Talk for visiting University of Duhok - Iraq

Fri 26 April 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migrated to Confluence 4.0"

I gave a talk today to some visiting Faculty from the visiting of Duhok, Iraq. We had an interesting discussion about the types of research problems we solve and the types of hardware we use to solve the problems. Here …

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Parallel Programming Paradigms

Wed 20 March 2013 by Dr. Dirk Colbry

Blog post edited by Anonymous - "Migrated to Confluence 4.0"

Below are the slides I gave as a guest lecturer to Pang-Ning Tan's CSE 491/891 class: "Computational Techniques for Large-Scale Data Analysis". I was particularly excited about putting these slides together because the summarized many concepts that I have …

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